Advanced Pattern Search Toolkit for Sequential Data is a group of tools that allow users to search for complex patterns in sequential data such as the genome, protein sequences, text, and times series data. The tools can also be accessed via a JavaTM API, can be integrated into existing solutions, and/or can be used to build stand-alone applications.
The toolkit assists in mining large data sequences for specific patterns. The tool identifies an ordered set of marker strings, if present, in the sequence. Features such as substitutive matching and spatial marker distribution-based elimination/inclusion are provided.